Github

Laboratory protocols and data-processing code from ChEM-H's Metabolic Chemistry Analysis Center at Stanford University

 

Gene Cluster Identification Software

plantiSMASH - identifying secondary metabolite biosynthetic gene clusters in plant genomes

BiG-SCAPE - Biosynthetic Genes Similarity Clustering and Prospecting Engine

Automated Gene Cluster Prediction (Github)

Enzyme Prediction Algorithm

eSNaPD v2.0 (Environmental Surveyor of Natural Product Diversity)

Genome Query

phylogeo: geographic analysis of microbiome data (Github)

PlantClusterFinder (Version 1.0)

Gene Cluster Engineering Software

Codon Optimization

Identifying chemical features in LC/MS data

MiSeq fastq preprocessing

mCRISTAR: multiplexed CRISPR and TAR

LC/MS Analysis Software

MOSAiC: The Metabolite Online Spectrum Analysis Center - a graphical user interface to analyze LC/MS data

Citizen Science

Drugs From Dirt